Monitoring of industrial processes is an important element ensuring the proper maintenance of equipment and high level of processes reliability. The presented research concerns the application of the deep learning method in the field of ultrasound tomography (UST). A novel algorithm that uses simultaneously multiple classification convolutional neural networks (CNNs) to generate monochrome 2D images was developed. In order to meet a compromise between the number of the networks and the number of all possible outcomes of a single network, it was proposed to divide the output image into 4-pixel clusters. Therefore, the number of required CNNs has been reduced fourfold and there are 16 distinct outcomes from single network. The new algorithm was first verified using simulation data and then tested on real data. The accuracy of image reconstruction exceeded 95%. The results obtained by using the new CNN clustered algorithm were compared with five popular machine learning algorithms: shallow Artificial Neural Network, Linear Support Vector Machine, Classification Tree, Medium k-Nearest Neighbor classification and Naive Bayes. Based on this comparison, it was found that the newly developed method of multiple convolutional neural networks (MCNN) generates the highest quality images.